Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003608annotation not available (348 aa)    
Predicted Functional Partners:
C1GALT1
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.871
GCNT1
Glucosaminyl (N-acetyl) transferase 1.
     
 0.861
ST6GALNAC1
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.
     
 0.853
ENSCAPP00000018200
annotation not available
 
     0.669
ENSCAPP00000008484
annotation not available
      
 0.572
ENSCAPP00000000165
annotation not available
      
 0.549
ZPLD1
Zona pellucida like domain containing 1.
      
 0.549
ENSCAPP00000012331
annotation not available
      
 0.549
LYPD3
LY6/PLAUR domain containing 3.
    
 
 0.540
GCNT4
Glucosaminyl (N-acetyl) transferase 4.
     
 0.521
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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