Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003617annotation not available (444 aa)    
Predicted Functional Partners:
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
 0.970
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.969
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.964
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 0.951
ENSCAPP00000010526
annotation not available
    
 0.945
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
    
 0.936
ENSCAPP00000002475
annotation not available
    
 0.934
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.931
WRN
WRN RecQ like helicase.
  
 0.930
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.915
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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