Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POLD1DNA polymerase delta 1, catalytic subunit. (1105 aa)    
Predicted Functional Partners:
POLD2
DNA polymerase delta 2, accessory subunit.
   
 0.999
POLE
DNA polymerase epsilon, catalytic subunit.
   
 0.999
ENSCAPP00000011399
annotation not available
   
 0.998
MAD2L2
Mitotic arrest deficient 2 like 2.
    
 0.997
RPA1
Replication protein A1.
   
 0.997
PCNA
Proliferating cell nuclear antigen.
  
 0.997
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 0.996
POLE2
DNA polymerase epsilon 2, accessory subunit.
   
 0.993
PRIM2
DNA primase subunit 2.
   
 0.992
ENSCAPP00000011079
annotation not available
   
 0.992
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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