STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003625annotation not available (384 aa)    
Predicted Functional Partners:
ENSCAPP00000018052
annotation not available
    
   0.753
ZSCAN29
Zinc finger and SCAN domain containing 29.
  
 
   0.711
PGBD5
piggyBac transposable element derived 5.
    
 0.684
ZSCAN20
Zinc finger and SCAN domain containing 20.
    
   0.611
ZNF213
Zinc finger protein 213.
    
   0.610
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.562
ZNF397
Zinc finger protein 397.
    
   0.554
KDM6B
Lysine demethylase 6B.
    
 0.552
ENSCAPP00000013045
annotation not available
    
  0.544
DKKL1
Dickkopf like acrosomal protein 1.
     
 0.542
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.