ERGIC3 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ERGIC3

ERGIC and golgi 3. (354 aa)

Predicted Functional Partners:

ENSCAPP00000015159

0.998

GTPBP3

0.971

VPS45

0.895

ENSCAPP00000004818

0.891

ENSCAPP00000002863

0.880

MED1

0.874

TRMU

0.843

MED24

0.827

YARS1

0.644

ENSCAPP00000014738

0.623

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000002863	ENSCAPP00000015159	ENSCAPP00000002863	ENSCAPP00000015159	annotation not available	annotation not available	0.613
ENSCAPP00000002863	ERGIC3	ENSCAPP00000002863	ENSCAPP00000003631	annotation not available	ERGIC and golgi 3.	0.880
ENSCAPP00000002863	MED1	ENSCAPP00000002863	ENSCAPP00000004450	annotation not available	Mediator complex subunit 1.	0.957
ENSCAPP00000004818	ENSCAPP00000014738	ENSCAPP00000004818	ENSCAPP00000014738	annotation not available	annotation not available	0.967
ENSCAPP00000004818	ENSCAPP00000015159	ENSCAPP00000004818	ENSCAPP00000015159	annotation not available	annotation not available	0.614
ENSCAPP00000004818	ERGIC3	ENSCAPP00000004818	ENSCAPP00000003631	annotation not available	ERGIC and golgi 3.	0.891
ENSCAPP00000004818	MED1	ENSCAPP00000004818	ENSCAPP00000004450	annotation not available	Mediator complex subunit 1.	0.998
ENSCAPP00000004818	MED24	ENSCAPP00000004818	ENSCAPP00000012634	annotation not available	Mediator complex subunit 24.	0.996
ENSCAPP00000014738	ENSCAPP00000004818	ENSCAPP00000014738	ENSCAPP00000004818	annotation not available	annotation not available	0.967
ENSCAPP00000014738	ERGIC3	ENSCAPP00000014738	ENSCAPP00000003631	annotation not available	ERGIC and golgi 3.	0.623
ENSCAPP00000014738	MED1	ENSCAPP00000014738	ENSCAPP00000004450	annotation not available	Mediator complex subunit 1.	0.972
ENSCAPP00000015159	ENSCAPP00000002863	ENSCAPP00000015159	ENSCAPP00000002863	annotation not available	annotation not available	0.613
ENSCAPP00000015159	ENSCAPP00000004818	ENSCAPP00000015159	ENSCAPP00000004818	annotation not available	annotation not available	0.614
ENSCAPP00000015159	ERGIC3	ENSCAPP00000015159	ENSCAPP00000003631	annotation not available	ERGIC and golgi 3.	0.998
ENSCAPP00000015159	GTPBP3	ENSCAPP00000015159	ENSCAPP00000017015	annotation not available	GTP binding protein 3, mitochondrial.	0.971
ENSCAPP00000015159	MED1	ENSCAPP00000015159	ENSCAPP00000004450	annotation not available	Mediator complex subunit 1.	0.452
ENSCAPP00000015159	TRMU	ENSCAPP00000015159	ENSCAPP00000012115	annotation not available	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.	0.843
ENSCAPP00000015159	YARS1	ENSCAPP00000015159	ENSCAPP00000006459	annotation not available	tyrosyl-tRNA synthetase 1.	0.644
ERGIC3	ENSCAPP00000002863	ENSCAPP00000003631	ENSCAPP00000002863	ERGIC and golgi 3.	annotation not available	0.880
ERGIC3	ENSCAPP00000004818	ENSCAPP00000003631	ENSCAPP00000004818	ERGIC and golgi 3.	annotation not available	0.891