Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ERGIC3ERGIC and golgi 3. (354 aa)    
Predicted Functional Partners:
ENSCAPP00000015159
annotation not available
   
 0.998
GTPBP3
GTP binding protein 3, mitochondrial.
  
 0.949
VPS45
Vacuolar protein sorting 45 homolog.
 
      0.895
ERGIC1
Endoplasmic reticulum-golgi intermediate compartment 1.
    
 
 0.884
MOGS
Mannosyl-oligosaccharide glucosidase.
   
   0.832
ERO1A
Endoplasmic reticulum oxidoreductase 1 alpha.
    
 
 0.823
ERO1B
Endoplasmic reticulum oxidoreductase 1 beta.
    
 
 0.823
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 0.779
MED1
Mediator complex subunit 1.
  
 
  0.731
MED6
Mediator complex subunit 6.
     
  0.731
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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