STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC58Coiled-coil domain containing 58. (122 aa)    
Predicted Functional Partners:
ENSCAPP00000003716
annotation not available
   
  
 0.709
SSBP1
Single stranded DNA binding protein 1.
   
    0.688
ENSCAPP00000016527
annotation not available
   
    0.672
MRPL39
Mitochondrial ribosomal protein L39.
   
    0.670
ATP5PF
ATP synthase peripheral stalk subunit F6.
   
  
 0.660
KATNBL1
Katanin regulatory subunit B1 like 1.
      
 0.566
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.566
ENSCAPP00000008186
annotation not available
      
 0.551
TMEM209
Transmembrane protein 209.
      
 0.550
MRPL35
Mitochondrial ribosomal protein L35.
   
    0.524
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.