Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC58Coiled-coil domain containing 58. (122 aa)    
Predicted Functional Partners:
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
   0.844
PHB2
Prohibitin 2.
    
   0.822
KATNBL1
Katanin regulatory subunit B1 like 1.
      
 0.819
ATP5PF
ATP synthase peripheral stalk subunit F6.
   
  
 0.802
ZZEF1
Zinc finger ZZ-type and EF-hand domain containing 1.
      
 0.752
PCBP2
poly(rC) binding protein 2.
   
 
 0.729
SSBP1
Single stranded DNA binding protein 1.
   
    0.708
ENSCAPP00000003716
annotation not available
   
  
 0.699
MRPL39
Mitochondrial ribosomal protein L39.
   
    0.690
MRPL35
Mitochondrial ribosomal protein L35.
   
    0.689
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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