Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003663annotation not available (266 aa)    
Predicted Functional Partners:
TMEM131L
Transmembrane 131 like.
   
    0.692
LTBP4
Latent transforming growth factor beta binding protein 4.
   
 0.676
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
  0.663
COL19A1
Collagen type XIX alpha 1 chain.
      
 0.658
FREM2
FRAS1 related extracellular matrix 2.
    
 0.623
OIT3
Oncoprotein induced transcript 3.
    
 0.612
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.578
CFAP36
Cilia and flagella associated protein 36.
      
 0.567
LTBP3
Latent transforming growth factor beta binding protein 3.
  
 0.490
PLA2G4A
Phospholipase A2 group IVA.
     
  0.482
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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