Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003665annotation not available (322 aa)    
Predicted Functional Partners:
ATP6V1B2
ATPase H+ transporting V1 subunit B2.
    
 
 0.934
ENSCAPP00000008947
annotation not available
    
 
 0.934
ATP6V1G1
ATPase H+ transporting V1 subunit G1.
    
   0.926
ENSCAPP00000017072
annotation not available
 
      0.900
RAB35
RAB35, member RAS oncogene family.
    
 0.799
ATP6V1G2
ATPase H+ transporting V1 subunit G2.
    
 
 0.596
IFT27
Intraflagellar transport 27.
    
 0.592
ENSCAPP00000010682
annotation not available
      
 0.585
SCN3A
Sodium voltage-gated channel alpha subunit 3.
   
  
 0.578
MEAK7
MTOR associated protein, eak-7 homolog.
      
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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