STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JADE1Jade family PHD finger 1. (509 aa)    
Predicted Functional Partners:
KAT7
Lysine acetyltransferase 7.
    
 0.960
MEAF6
MYST/Esa1 associated factor 6.
    
 0.952
ING4
Inhibitor of growth family member 4.
    
 0.881
ING5
Inhibitor of growth family member 5.
    
 0.825
ENSCAPP00000014420
annotation not available
    
 0.765
KAT8
Lysine acetyltransferase 8.
    
 0.765
ENSCAPP00000011011
annotation not available
    
 
 0.636
KAT6A
Lysine acetyltransferase 6A.
    
 0.635
ENSCAPP00000002922
annotation not available
    
 0.635
ENSCAPP00000010610
annotation not available
    
 0.635
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.