Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JADE1Jade family PHD finger 1. (509 aa)    
Predicted Functional Partners:
KAT7
Lysine acetyltransferase 7.
    
 0.987
MEAF6
MYST/Esa1 associated factor 6.
    
 0.983
ING4
Inhibitor of growth family member 4.
    
 0.952
ING5
Inhibitor of growth family member 5.
    
 0.950
ENSCAPP00000011011
annotation not available
    
 
 0.907
ENSCAPP00000014420
annotation not available
    
 0.877
KAT8
Lysine acetyltransferase 8.
    
 0.861
YJU2
YJU2 splicing factor homolog.
    
   0.709
SFMBT2
Scm like with four mbt domains 2.
      
 0.691
SMOC1
SPARC related modular calcium binding 1.
      
 0.688
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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