Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003668annotation not available (135 aa)    
Predicted Functional Partners:
USE1
Unconventional SNARE in the ER 1.
   
 0.999
STX18
Syntaxin 18.
   
 0.999
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene).
    
 0.997
STX12
Syntaxin 12.
    
 0.993
NAPA
NSF attachment protein alpha.
    
 0.992
RINT1
RAD50 interactor 1.
    
 0.991
STX6
Syntaxin 6.
   
 0.989
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.989
STX16
Syntaxin 16.
   
 0.983
ZW10
Zw10 kinetochore protein.
    
 0.983
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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