Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003676annotation not available (94 aa)    
Predicted Functional Partners:
NISCH
Nischarin.
      
 0.754
KIF22
Kinesin family member 22.
    
 0.729
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.719
MAPK3
Mitogen-activated protein kinase 3.
    
 0.715
EPOR
Erythropoietin receptor.
    
 
 0.664
CDK6
Cyclin dependent kinase 6.
    
 0.639
TRAF7
TNF receptor associated factor 7.
   
  0.621
RNF4
Ring finger protein 4.
    
 
 0.612
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
   
 0.598
ENSCAPP00000017790
annotation not available
   
 0.598
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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