STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003685annotation not available (150 aa)    
Predicted Functional Partners:
TEX12
Testis expressed 12.
    
 0.981
SYCE3
Synaptonemal complex central element protein 3.
    
 0.842
ENSCAPP00000001537
annotation not available
     
 0.686
STAG1
Stromal antigen 1.
     
 0.683
SMC3
Structural maintenance of chromosomes 3.
     
 0.681
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.557
C14orf39
Chromosome 14 open reading frame 39.
      
 0.555
ENSCAPP00000002555
annotation not available
      
 0.552
ENSCAPP00000018587
annotation not available
      
 0.550
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.548
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.