Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003691annotation not available (443 aa)    
Predicted Functional Partners:
PCBP2
poly(rC) binding protein 2.
   
 0.995
ENSCAPP00000002274
annotation not available
   
 0.992
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.992
ENSCAPP00000006614
annotation not available
   
 0.984
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.984
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.983
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.980
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.979
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.978
ENSCAPP00000003525
annotation not available
   
 0.977
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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