Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXO38F-box protein 38. (1125 aa)    
Predicted Functional Partners:
USP7
Ubiquitin specific peptidase 7.
    
 
 0.969
CUL1
Cullin 1.
    
 
 0.967
TDRP
Testis development related protein.
      
 0.926
SKP1
S-phase kinase associated protein 1.
    
 
 0.918
RNF169
Ring finger protein 169.
    
 
 0.880
CUL3
Cullin 3.
    
 
 0.824
STYX
Serine/threonine/tyrosine interacting protein.
    
   0.815
ENSCAPP00000015494
annotation not available
   
  
 0.803
KLF7
Kruppel like factor 7.
    
 
 0.781
USP40
Ubiquitin specific peptidase 40.
    
 
 0.719
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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