STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO38F-box protein 38. (1125 aa)    
Predicted Functional Partners:
TRAPPC11
Trafficking protein particle complex 11.
   
    0.692
WDR48
WD repeat domain 48.
   
    0.685
KLF7
Kruppel like factor 7.
    
 
 0.624
CUL1
Cullin 1.
    
 
 0.581
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.578
TDRP
Testis development related protein.
      
 0.568
SMOC2
SPARC related modular calcium binding 2.
      
 0.554
ENSCAPP00000017751
annotation not available
   
  
 0.542
CUL3
Cullin 3.
    
   0.512
USP7
Ubiquitin specific peptidase 7.
    
 
 0.501
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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