STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR2A5-hydroxytryptamine receptor 2A. (470 aa)    
Predicted Functional Partners:
HTR2C
5-hydroxytryptamine receptor 2C.
   
 0.985
HTR2B
5-hydroxytryptamine receptor 2B.
   
 0.971
ENSCAPP00000005162
annotation not available
    
  0.921
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
     
 0.920
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
     
 0.916
ENSCAPP00000003482
annotation not available
    
 0.916
CACNA1F
Calcium voltage-gated channel subunit alpha1 F.
     
  0.911
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
     
 0.911
GNAI3
G protein subunit alpha i3.
    
 0.904
GNAQ
G protein subunit alpha q.
    
 0.897
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.