STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEND3BEN domain containing 3. (829 aa)    
Predicted Functional Partners:
ENSCAPP00000006358
annotation not available
      
 0.632
ERCC6L2
ERCC excision repair 6 like 2.
    
 
 0.626
CHRD
Chordin.
    
 0.608
SERPINA12
Serpin family A member 12.
     
 0.592
ZSCAN21
Zinc finger and SCAN domain containing 21.
    
 0.582
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.582
QRSL1
glutaminyl-tRNA amidotransferase subunit QRSL1.
      
 0.577
ENSCAPP00000000252
annotation not available
      
 0.573
MORC3
MORC family CW-type zinc finger 3.
      
 0.571
BANP
BTG3 associated nuclear protein.
      
 0.571
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.