STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003696annotation not available (530 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
    
 0.507
VAPA
VAMP associated protein A.
    
 0.506
LMAN1
Lectin, mannose binding 1.
    
  0.504
BCAP31
B cell receptor associated protein 31.
   
  0.482
LMAN1L
Lectin, mannose binding 1 like.
    
  0.456
ENSCAPP00000012825
annotation not available
   
  0.453
ATP6AP1
ATPase H+ transporting accessory protein 1.
   
 
  0.443
MOSPD1
Motile sperm domain containing 1.
    
 0.433
MOSPD3
Motile sperm domain containing 3.
    
 0.433
PDZD8
PDZ domain containing 8.
   
  
 0.431
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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