Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003716annotation not available (45 aa)    
Predicted Functional Partners:
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.999
TIMM8A
Translocase of inner mitochondrial membrane 8A.
   
 0.999
TIMM22
Translocase of inner mitochondrial membrane 22.
   
 0.996
AGK
Acylglycerol kinase.
    
 0.991
TIMM8B
Translocase of inner mitochondrial membrane 8 homolog B.
   
 0.989
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 0.961
TRMT10B
tRNA methyltransferase 10B.
   
  0.937
ENSCAPP00000006226
annotation not available
    
 0.923
CACTIN
Cactin, spliceosome C complex subunit.
   
 0.903
CISD2
CDGSH iron sulfur domain 2.
   
 0.903
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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