STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG3Autophagy related 3. (273 aa)    
Predicted Functional Partners:
ATG5
Autophagy related 5.
   
 0.999
ATG12
Autophagy related 12.
    
 0.999
ATG7
Autophagy related 7.
    
 0.999
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.999
ATG16L1
Autophagy related 16 like 1.
   
 0.998
ENSCAPP00000010142
annotation not available
   
 0.998
ENSCAPP00000017351
annotation not available
  
 0.998
ATG16L2
Autophagy related 16 like 2.
   
 0.993
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.973
ENSCAPP00000005383
annotation not available
   
 0.966
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.