Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003732annotation not available (60 aa)    
Predicted Functional Partners:
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.999
ENSCAPP00000010370
annotation not available
   
 0.999
STX5
Syntaxin 5.
   
 0.999
ENSCAPP00000000230
annotation not available
   
 0.998
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene).
   
 0.998
STX18
Syntaxin 18.
   
 0.997
ENSCAPP00000011016
annotation not available
   
 0.996
USE1
Unconventional SNARE in the ER 1.
   
 0.995
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.995
NAPA
NSF attachment protein alpha.
    
 0.995
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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