ENSCAPP00000003739 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSCAPP00000003739

annotation not available (209 aa)

Predicted Functional Partners:

TUBGCP5

0.865

PRPF8

0.843

SNRNP40

0.843

TUBGCP6

0.789

TUBGCP3

0.789

TUBGCP4

0.787

MCCC2

0.786

PCCB

0.786

TUBGCP2

0.781

TUBG1

0.731

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000003739	MCCC2	ENSCAPP00000003739	ENSCAPP00000000018	annotation not available	methylcrotonoyl-CoA carboxylase 2.	0.786
ENSCAPP00000003739	PCCB	ENSCAPP00000003739	ENSCAPP00000000834	annotation not available	propionyl-CoA carboxylase subunit beta.	0.786
ENSCAPP00000003739	PRPF8	ENSCAPP00000003739	ENSCAPP00000007640	annotation not available	pre-mRNA processing factor 8.	0.843
ENSCAPP00000003739	SNRNP40	ENSCAPP00000003739	ENSCAPP00000018274	annotation not available	Small nuclear ribonucleoprotein U5 subunit 40.	0.843
ENSCAPP00000003739	TUBG1	ENSCAPP00000003739	ENSCAPP00000004614	annotation not available	Tubulin gamma 1.	0.731
ENSCAPP00000003739	TUBGCP2	ENSCAPP00000003739	ENSCAPP00000011862	annotation not available	Tubulin gamma complex associated protein 2.	0.781
ENSCAPP00000003739	TUBGCP3	ENSCAPP00000003739	ENSCAPP00000014783	annotation not available	Tubulin gamma complex associated protein 3.	0.789
ENSCAPP00000003739	TUBGCP4	ENSCAPP00000003739	ENSCAPP00000014330	annotation not available	Tubulin gamma complex associated protein 4.	0.787
ENSCAPP00000003739	TUBGCP5	ENSCAPP00000003739	ENSCAPP00000014998	annotation not available	Tubulin gamma complex associated protein 5.	0.865
ENSCAPP00000003739	TUBGCP6	ENSCAPP00000003739	ENSCAPP00000011135	annotation not available	Tubulin gamma complex associated protein 6.	0.789
MCCC2	ENSCAPP00000003739	ENSCAPP00000000018	ENSCAPP00000003739	methylcrotonoyl-CoA carboxylase 2.	annotation not available	0.786
MCCC2	PCCB	ENSCAPP00000000018	ENSCAPP00000000834	methylcrotonoyl-CoA carboxylase 2.	propionyl-CoA carboxylase subunit beta.	0.765
PCCB	ENSCAPP00000003739	ENSCAPP00000000834	ENSCAPP00000003739	propionyl-CoA carboxylase subunit beta.	annotation not available	0.786
PCCB	MCCC2	ENSCAPP00000000834	ENSCAPP00000000018	propionyl-CoA carboxylase subunit beta.	methylcrotonoyl-CoA carboxylase 2.	0.765
PRPF8	ENSCAPP00000003739	ENSCAPP00000007640	ENSCAPP00000003739	pre-mRNA processing factor 8.	annotation not available	0.843
PRPF8	SNRNP40	ENSCAPP00000007640	ENSCAPP00000018274	pre-mRNA processing factor 8.	Small nuclear ribonucleoprotein U5 subunit 40.	0.999
SNRNP40	ENSCAPP00000003739	ENSCAPP00000018274	ENSCAPP00000003739	Small nuclear ribonucleoprotein U5 subunit 40.	annotation not available	0.843
SNRNP40	PRPF8	ENSCAPP00000018274	ENSCAPP00000007640	Small nuclear ribonucleoprotein U5 subunit 40.	pre-mRNA processing factor 8.	0.999
TUBG1	ENSCAPP00000003739	ENSCAPP00000004614	ENSCAPP00000003739	Tubulin gamma 1.	annotation not available	0.731
TUBG1	TUBGCP2	ENSCAPP00000004614	ENSCAPP00000011862	Tubulin gamma 1.	Tubulin gamma complex associated protein 2.	0.990