APCS protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

APCS

Amyloid P component, serum. (215 aa)

Predicted Functional Partners:

ENSCAPP00000017271

0.842

HRG

0.827

ITIH4

0.723

CRP

0.714

ENSCAPP00000009416

0.712

TTR

0.705

FGB

0.700

FBP1

0.694

ENSCAPP00000015384

0.688

SLC27A2

0.683

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APCS	CRP	ENSCAPP00000003747	ENSCAPP00000012951	Amyloid P component, serum.	C-reactive protein.	0.714
APCS	ENSCAPP00000009416	ENSCAPP00000003747	ENSCAPP00000009416	Amyloid P component, serum.	annotation not available	0.712
APCS	ENSCAPP00000015384	ENSCAPP00000003747	ENSCAPP00000015384	Amyloid P component, serum.	annotation not available	0.688
APCS	ENSCAPP00000017271	ENSCAPP00000003747	ENSCAPP00000017271	Amyloid P component, serum.	annotation not available	0.842
APCS	FBP1	ENSCAPP00000003747	ENSCAPP00000005445	Amyloid P component, serum.	Fructose-bisphosphatase 1.	0.694
APCS	FGB	ENSCAPP00000003747	ENSCAPP00000001554	Amyloid P component, serum.	Fibrinogen beta chain.	0.700
APCS	HRG	ENSCAPP00000003747	ENSCAPP00000008638	Amyloid P component, serum.	Histidine rich glycoprotein.	0.827
APCS	ITIH4	ENSCAPP00000003747	ENSCAPP00000001239	Amyloid P component, serum.	Inter-alpha-trypsin inhibitor heavy chain 4.	0.723
APCS	SLC27A2	ENSCAPP00000003747	ENSCAPP00000000634	Amyloid P component, serum.	Solute carrier family 27 member 2.	0.683
APCS	TTR	ENSCAPP00000003747	ENSCAPP00000011629	Amyloid P component, serum.	Transthyretin.	0.705
CRP	APCS	ENSCAPP00000012951	ENSCAPP00000003747	C-reactive protein.	Amyloid P component, serum.	0.714
CRP	ENSCAPP00000017271	ENSCAPP00000012951	ENSCAPP00000017271	C-reactive protein.	annotation not available	0.458
CRP	TTR	ENSCAPP00000012951	ENSCAPP00000011629	C-reactive protein.	Transthyretin.	0.567
ENSCAPP00000009416	APCS	ENSCAPP00000009416	ENSCAPP00000003747	annotation not available	Amyloid P component, serum.	0.712
ENSCAPP00000009416	ENSCAPP00000017271	ENSCAPP00000009416	ENSCAPP00000017271	annotation not available	annotation not available	0.437
ENSCAPP00000009416	FGB	ENSCAPP00000009416	ENSCAPP00000001554	annotation not available	Fibrinogen beta chain.	0.531
ENSCAPP00000009416	HRG	ENSCAPP00000009416	ENSCAPP00000008638	annotation not available	Histidine rich glycoprotein.	0.834
ENSCAPP00000015384	APCS	ENSCAPP00000015384	ENSCAPP00000003747	annotation not available	Amyloid P component, serum.	0.688
ENSCAPP00000015384	ENSCAPP00000017271	ENSCAPP00000015384	ENSCAPP00000017271	annotation not available	annotation not available	0.420
ENSCAPP00000015384	FBP1	ENSCAPP00000015384	ENSCAPP00000005445	annotation not available	Fructose-bisphosphatase 1.	0.420