Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
HS6ST1Heparan sulfate 6-O-sulfotransferase 1. (289 aa)    
Predicted Functional Partners:
GLCE
Glucuronic acid epimerase.
    
 
 0.932
ENSCAPP00000010244
annotation not available
    
 
 0.715
B3GAT3
Beta-1,3-glucuronyltransferase 3.
      
 0.684
HS3ST1
Heparan sulfate-glucosamine 3-sulfotransferase 1.
      
 0.600
SDC1
Syndecan 1.
     
 0.597
HS3ST5
Heparan sulfate-glucosamine 3-sulfotransferase 5.
      
 0.572
NSMF
NMDA receptor synaptonuclear signaling and neuronal migration factor.
      
 0.571
ENSCAPP00000017674
annotation not available
      
 0.571
EXTL3
Exostosin like glycosyltransferase 3.
      
 0.569
LMAN1
Lectin, mannose binding 1.
      
 0.568
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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