STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMTC2Transmembrane O-mannosyltransferase targeting cadherins 2. (729 aa)    
Predicted Functional Partners:
INTS1
Integrator complex subunit 1.
    
 0.870
INTS11
Integrator complex subunit 11.
  
 0.852
INTS13
Integrator complex subunit 13.
    
 0.848
INTS10
Integrator complex subunit 10.
    
 0.842
INTS5
Integrator complex subunit 5.
    
 0.834
INTS9
Integrator complex subunit 9.
   
 0.819
INTS3
Integrator complex subunit 3.
    
 0.771
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.735
INTS12
Integrator complex subunit 12.
    
 0.716
SDF2
Stromal cell derived factor 2.
     
 0.710
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.