STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003757annotation not available (555 aa)    
Predicted Functional Partners:
NUP214
Nucleoporin 214.
    
 0.993
SNUPN
Snurportin 1.
    
 0.986
NUP98
Nucleoporin 98.
    
 0.977
NUP88
Nucleoporin 88.
    
 0.972
RANBP2
RAN binding protein 2.
   
 
 0.962
ENSCAPP00000005086
annotation not available
   
 
 0.944
ENSCAPP00000018461
annotation not available
   
 
 0.944
PKIA
cAMP-dependent protein kinase inhibitor alpha.
    
 
 0.930
RANGAP1
Ran GTPase activating protein 1.
    
 
 0.908
HACD2
3-hydroxyacyl-CoA dehydratase 2.
    
 
 0.907
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.