STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRC2AProline rich coiled-coil 2A. (1857 aa)    
Predicted Functional Partners:
CIC
Capicua transcriptional repressor.
   
    0.670
ENSCAPP00000008824
annotation not available
   
    0.669
CAPRIN1
Cell cycle associated protein 1.
   
 
 0.652
RBM42
RNA binding motif protein 42.
   
 
 0.648
BAG6
BCL2 associated athanogene 6.
  
  
 0.613
ENSCAPP00000005247
annotation not available
   
 
 0.605
UBAP2L
Ubiquitin associated protein 2 like.
   
 
 0.605
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.556
ENSCAPP00000012750
annotation not available
   
   0.556
EIF3H
Eukaryotic translation initiation factor 3 subunit H.
    
 
 0.547
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.