STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFSD9Major facilitator superfamily domain containing 9. (417 aa)    
Predicted Functional Partners:
SGF29
SAGA complex associated factor 29.
   
 
  0.605
TAF1B
TATA-box binding protein associated factor, RNA polymerase I subunit B.
   
 
  0.605
SPNS1
Sphingolipid transporter 1 (putative).
   
  
 0.595
MFSD11
Major facilitator superfamily domain containing 11.
      
 0.563
TMEM182
Transmembrane protein 182.
      
 0.561
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.561
SVOP
SV2 related protein.
      
 0.560
PGAP3
post-GPI attachment to proteins phospholipase 3.
      
 0.560
IL18R1
Interleukin 18 receptor 1.
      
 0.556
SLC29A3
Solute carrier family 29 member 3.
      
 0.555
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.