STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH8alkB homolog 8, tRNA methyltransferase. (478 aa)    
Predicted Functional Partners:
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.807
MED6
Mediator complex subunit 6.
   
 
  0.641
AFDN
Afadin, adherens junction formation factor.
    
  0.640
ALKBH7
alkB homolog 7.
      
 0.562
ALKBH1
alkB homolog 1, histone H2A dioxygenase.
      
 0.562
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.553
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
      
 0.546
ENSCAPP00000014353
annotation not available
   
  
 0.446
METTL14
Methyltransferase like 14.
   
  
 0.445
ELP2
Elongator acetyltransferase complex subunit 2.
      
 0.439
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.