STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BICD1BICD cargo adaptor 1. (785 aa)    
Predicted Functional Partners:
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.949
ENSCAPP00000008774
annotation not available
    
 0.940
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
    
 0.917
RAB6A
RAB6A, member RAS oncogene family.
    
 0.855
RAB6B
RAB6B, member RAS oncogene family.
    
 0.855
FAM193B
Family with sequence similarity 193 member B.
    
 0.832
RAB34
RAB34, member RAS oncogene family.
    
 0.793
DYNC1I2
Dynein cytoplasmic 1 intermediate chain 2.
    
 0.769
ENSCAPP00000001104
annotation not available
    
  0.768
ENSCAPP00000016814
annotation not available
    
  0.768
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.