STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BICD1BICD cargo adaptor 1. (785 aa)    
Predicted Functional Partners:
BICD2
BICD cargo adaptor 2.
   
  0.986
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.960
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
    
 0.944
ENSCAPP00000008774
annotation not available
    
 0.941
RAB6A
RAB6A, member RAS oncogene family.
    
 0.917
RAB6B
RAB6B, member RAS oncogene family.
    
 0.917
RANBP2
RAN binding protein 2.
    
 
 0.895
HOOK3
Hook microtubule tethering protein 3.
   
 
 0.887
PLK1
Polo like kinase 1.
    
   0.825
ENSCAPP00000001104
annotation not available
    
 0.815
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.