Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GRID1Glutamate ionotropic receptor delta type subunit 1. (930 aa)    
Predicted Functional Partners:
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 0.970
GRID2
Glutamate ionotropic receptor delta type subunit 2.
   
  0.957
ENSCAPP00000012033
annotation not available
   
  0.957
DLG4
Discs large MAGUK scaffold protein 4.
    
 0.914
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
   
  0.913
NRXN3
Neurexin 3.
    
 0.912
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
   
 0.903
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
  0.902
CACNG4
Calcium voltage-gated channel auxiliary subunit gamma 4.
     
 0.901
ABHD6
Abhydrolase domain containing 6.
     
  0.898
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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