Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003791annotation not available (575 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2 group IVA.
     
 0.733
PLB1
Phospholipase B1.
   
  0.521
PLA2G6
Phospholipase A2 group VI.
    
  0.514
CAV3
Caveolin 3.
    
 0.510
ENSCAPP00000007544
annotation not available
     
 0.498
GOT2
Glutamic-oxaloacetic transaminase 2.
    
 0.497
PRXL2A
Peroxiredoxin like 2A.
     
 0.479
GOT1
Glutamic-oxaloacetic transaminase 1.
    
 0.474
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
    
 0.474
TAT
Tyrosine aminotransferase.
     
  0.472
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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