STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP11Matrix metallopeptidase 11. (481 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.768
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.757
FURIN
Furin, paired basic amino acid cleaving enzyme.
    
 0.720
PCSK4
Proprotein convertase subtilisin/kexin type 4.
    
 0.710
TNC
Tenascin C.
    
 0.695
TNR
Tenascin R.
    
 0.695
TNN
Tenascin N.
    
 0.695
MMP7
Matrix metallopeptidase 7.
  
  
0.626
ENSCAPP00000001035
annotation not available
  
0.621
MMP3
Matrix metallopeptidase 3.
  
0.593
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.