ENSCAPP00000003816 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000003816

annotation not available (1153 aa)

Predicted Functional Partners:

RASA1

0.997

ENSCAPP00000012909

0.986

ENSCAPP00000006439

0.984

RND1

0.958

PTK6

0.953

ENSCAPP00000006795

0.938

SRC

0.934

ENSCAPP00000013530

0.934

THY1

0.911

RND2

0.840

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000003816	ENSCAPP00000006439	ENSCAPP00000003816	ENSCAPP00000006439	annotation not available	annotation not available	0.984
ENSCAPP00000003816	ENSCAPP00000006795	ENSCAPP00000003816	ENSCAPP00000006795	annotation not available	annotation not available	0.938
ENSCAPP00000003816	ENSCAPP00000012909	ENSCAPP00000003816	ENSCAPP00000012909	annotation not available	annotation not available	0.986
ENSCAPP00000003816	ENSCAPP00000013530	ENSCAPP00000003816	ENSCAPP00000013530	annotation not available	annotation not available	0.934
ENSCAPP00000003816	PTK6	ENSCAPP00000003816	ENSCAPP00000004050	annotation not available	Protein tyrosine kinase 6.	0.953
ENSCAPP00000003816	RASA1	ENSCAPP00000003816	ENSCAPP00000016704	annotation not available	RAS p21 protein activator 1.	0.997
ENSCAPP00000003816	RND1	ENSCAPP00000003816	ENSCAPP00000002218	annotation not available	Rho family GTPase 1.	0.958
ENSCAPP00000003816	RND2	ENSCAPP00000003816	ENSCAPP00000006470	annotation not available	Rho family GTPase 2.	0.840
ENSCAPP00000003816	SRC	ENSCAPP00000003816	ENSCAPP00000004263	annotation not available	SRC proto-oncogene, non-receptor tyrosine kinase.	0.934
ENSCAPP00000003816	THY1	ENSCAPP00000003816	ENSCAPP00000002160	annotation not available	Thy-1 cell surface antigen.	0.911
ENSCAPP00000006439	ENSCAPP00000003816	ENSCAPP00000006439	ENSCAPP00000003816	annotation not available	annotation not available	0.984
ENSCAPP00000006439	ENSCAPP00000006795	ENSCAPP00000006439	ENSCAPP00000006795	annotation not available	annotation not available	0.781
ENSCAPP00000006439	ENSCAPP00000013530	ENSCAPP00000006439	ENSCAPP00000013530	annotation not available	annotation not available	0.711
ENSCAPP00000006439	PTK6	ENSCAPP00000006439	ENSCAPP00000004050	annotation not available	Protein tyrosine kinase 6.	0.773
ENSCAPP00000006439	RASA1	ENSCAPP00000006439	ENSCAPP00000016704	annotation not available	RAS p21 protein activator 1.	0.618
ENSCAPP00000006439	RND1	ENSCAPP00000006439	ENSCAPP00000002218	annotation not available	Rho family GTPase 1.	0.855
ENSCAPP00000006439	SRC	ENSCAPP00000006439	ENSCAPP00000004263	annotation not available	SRC proto-oncogene, non-receptor tyrosine kinase.	0.711
ENSCAPP00000006795	ENSCAPP00000003816	ENSCAPP00000006795	ENSCAPP00000003816	annotation not available	annotation not available	0.938
ENSCAPP00000006795	ENSCAPP00000006439	ENSCAPP00000006795	ENSCAPP00000006439	annotation not available	annotation not available	0.781
ENSCAPP00000006795	ENSCAPP00000012909	ENSCAPP00000006795	ENSCAPP00000012909	annotation not available	annotation not available	0.788