TIMELESS protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TIMELESS

Timeless circadian regulator. (1089 aa)

Predicted Functional Partners:

TIPIN

0.999

MCM6

0.998

MCM2

0.998

WDHD1

0.998

ENSCAPP00000009470

0.998

ENSCAPP00000013166

0.998

CDC45

0.997

ENSCAPP00000002903

0.997

MCM3

0.997

GINS4

0.996

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC45	ENSCAPP00000002903	ENSCAPP00000000963	ENSCAPP00000002903	Cell division cycle 45.	annotation not available	0.999
CDC45	ENSCAPP00000009470	ENSCAPP00000000963	ENSCAPP00000009470	Cell division cycle 45.	annotation not available	0.999
CDC45	ENSCAPP00000013166	ENSCAPP00000000963	ENSCAPP00000013166	Cell division cycle 45.	annotation not available	0.999
CDC45	GINS4	ENSCAPP00000000963	ENSCAPP00000013320	Cell division cycle 45.	GINS complex subunit 4.	0.999
CDC45	MCM2	ENSCAPP00000000963	ENSCAPP00000003876	Cell division cycle 45.	Minichromosome maintenance complex component 2.	0.999
CDC45	MCM3	ENSCAPP00000000963	ENSCAPP00000013580	Cell division cycle 45.	Minichromosome maintenance complex component 3.	0.999
CDC45	MCM6	ENSCAPP00000000963	ENSCAPP00000000980	Cell division cycle 45.	Minichromosome maintenance complex component 6.	0.999
CDC45	TIMELESS	ENSCAPP00000000963	ENSCAPP00000003817	Cell division cycle 45.	Timeless circadian regulator.	0.997
CDC45	TIPIN	ENSCAPP00000000963	ENSCAPP00000017792	Cell division cycle 45.	TIMELESS interacting protein.	0.997
CDC45	WDHD1	ENSCAPP00000000963	ENSCAPP00000005270	Cell division cycle 45.	WD repeat and HMG-box DNA binding protein 1.	0.999
ENSCAPP00000002903	CDC45	ENSCAPP00000002903	ENSCAPP00000000963	annotation not available	Cell division cycle 45.	0.999
ENSCAPP00000002903	ENSCAPP00000009470	ENSCAPP00000002903	ENSCAPP00000009470	annotation not available	annotation not available	0.999
ENSCAPP00000002903	ENSCAPP00000013166	ENSCAPP00000002903	ENSCAPP00000013166	annotation not available	annotation not available	0.999
ENSCAPP00000002903	GINS4	ENSCAPP00000002903	ENSCAPP00000013320	annotation not available	GINS complex subunit 4.	0.999
ENSCAPP00000002903	MCM2	ENSCAPP00000002903	ENSCAPP00000003876	annotation not available	Minichromosome maintenance complex component 2.	0.999
ENSCAPP00000002903	MCM3	ENSCAPP00000002903	ENSCAPP00000013580	annotation not available	Minichromosome maintenance complex component 3.	0.999
ENSCAPP00000002903	MCM6	ENSCAPP00000002903	ENSCAPP00000000980	annotation not available	Minichromosome maintenance complex component 6.	0.999
ENSCAPP00000002903	TIMELESS	ENSCAPP00000002903	ENSCAPP00000003817	annotation not available	Timeless circadian regulator.	0.997
ENSCAPP00000002903	TIPIN	ENSCAPP00000002903	ENSCAPP00000017792	annotation not available	TIMELESS interacting protein.	0.997
ENSCAPP00000002903	WDHD1	ENSCAPP00000002903	ENSCAPP00000005270	annotation not available	WD repeat and HMG-box DNA binding protein 1.	0.999