Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003820annotation not available (292 aa)    
Predicted Functional Partners:
BUB3
BUB3 mitotic checkpoint protein.
   
 
 0.983
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
   0.968
ENSCAPP00000001654
annotation not available
   
 
 0.936
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
    
 
 0.895
ENSCAPP00000009173
annotation not available
   
 
 0.815
SRSF10
Serine and arginine rich splicing factor 10.
   
 
 0.775
ENSCAPP00000004425
annotation not available
   
 
 0.774
ENSCAPP00000007727
annotation not available
   
 
 0.774
ENSCAPP00000018132
annotation not available
   
 
 0.774
SRSF3
Serine and arginine rich splicing factor 3.
   
    0.757
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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