Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003830annotation not available (1665 aa)    
Predicted Functional Partners:
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.989
CXXC1
CXXC finger protein 1.
    
 0.988
WDR5
WD repeat domain 5.
    
 0.984
ENSCAPP00000015921
annotation not available
    
 0.984
HCFC1
Host cell factor C1.
   
 0.983
WDR82
WD repeat domain 82.
   
 0.982
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.977
DOT1L
DOT1 like histone lysine methyltransferase.
   
 0.975
HCFC2
Host cell factor C2.
   
 0.957
KDM6B
Lysine demethylase 6B.
   
 0.927
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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