STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003830annotation not available (1665 aa)    
Predicted Functional Partners:
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.989
CXXC1
CXXC finger protein 1.
   
 0.989
ENSCAPP00000015921
annotation not available
    
 0.989
WDR82
WD repeat domain 82.
    
 0.988
WDR5
WD repeat domain 5.
    
 0.946
ENSCAPP00000001550
annotation not available
    
 0.943
HCFC1
Host cell factor C1.
   
 0.932
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
0.929
DOT1L
DOT1 like histone lysine methyltransferase.
   
 0.923
ENSCAPP00000007306
annotation not available
   
 0.905
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.