Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBE2Q2Ubiquitin conjugating enzyme E2 Q2. (214 aa)    
Predicted Functional Partners:
UBA1
Ubiquitin like modifier activating enzyme 1.
   
 0.872
UBE2Q1
Ubiquitin conjugating enzyme E2 Q1.
     
  0.854
TMEM231
Transmembrane protein 231.
     
  0.766
UBA7
Ubiquitin like modifier activating enzyme 7.
   
 0.732
ENSCAPP00000011154
annotation not available
     
 0.679
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 
 0.661
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 0.654
UBA5
Ubiquitin like modifier activating enzyme 5.
    
 0.644
UBE2B
Ubiquitin conjugating enzyme E2 B.
     
 0.640
ENSCAPP00000001066
annotation not available
     
 0.622
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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