Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTLL9Tubulin tyrosine ligase like 9. (465 aa)    
Predicted Functional Partners:
CCT3
Chaperonin containing TCP1 subunit 3.
    
   0.832
ENSCAPP00000004667
annotation not available
     
  0.831
EDN1
Endothelin 1.
     
  0.831
EDNRA
Endothelin receptor type A.
     
  0.831
TTLL12
Tubulin tyrosine ligase like 12.
    
 
 0.711
HIVEP3
HIVEP zinc finger 3.
     
  0.699
HIVEP2
HIVEP zinc finger 2.
     
  0.699
DRC7
Dynein regulatory complex subunit 7.
      
 0.676
TMEM17
Transmembrane protein 17.
      
 0.665
ENSCAPP00000003376
annotation not available
    
   0.622
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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