STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003845annotation not available (294 aa)    
Predicted Functional Partners:
RRP36
Ribosomal RNA processing 36.
      
 0.559
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.558
ENSCAPP00000016687
annotation not available
      
 0.553
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.549
ENSCAPP00000016117
annotation not available
      
 0.547
ENSCAPP00000011858
annotation not available
      
 0.546
TRAPPC6A
Trafficking protein particle complex 6A.
      
 0.545
ENSCAPP00000009908
annotation not available
      
 0.528
IFT140
Intraflagellar transport 140.
      
 0.527
KLHDC8B
Kelch domain containing 8B.
      
 0.526
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.