Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003845annotation not available (294 aa)    
Predicted Functional Partners:
RRP36
Ribosomal RNA processing 36.
      
 0.728
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.688
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.687
ENSCAPP00000016687
annotation not available
      
 0.677
ENSCAPP00000016117
annotation not available
      
 0.667
KLHDC8B
Kelch domain containing 8B.
      
 0.663
ENSCAPP00000013077
annotation not available
      
 0.644
ENSCAPP00000011858
annotation not available
      
 0.624
ENSCAPP00000009908
annotation not available
      
 0.602
IFT140
Intraflagellar transport 140.
      
 0.580
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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