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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003849annotation not available (967 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3.
    
 0.825
SLC8B1
Solute carrier family 8 member B1.
   
 
 0.674
TMCO3
Transmembrane and coiled-coil domains 3.
   
 
 0.597
SMC1A
Structural maintenance of chromosomes 1A.
    
  0.593
SMC1B
Structural maintenance of chromosomes 1B.
    
  0.593
ADCY10
Adenylate cyclase 10.
    
 0.542
RAD21L1
RAD21 cohesin complex component like 1.
     
 0.511
RAD21
RAD21 cohesin complex component.
     
 0.511
REC8
REC8 meiotic recombination protein.
     
 0.511
SLC7A13
Solute carrier family 7 member 13.
   
 
 0.491
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.