Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003849annotation not available (967 aa)    
Predicted Functional Partners:
SCN4A
Sodium voltage-gated channel alpha subunit 4.
    
 0.879
SCNN1G
Sodium channel epithelial 1 gamma subunit.
     
 0.874
SCN3B
Sodium voltage-gated channel beta subunit 3.
     
  0.861
SCN4B
Sodium voltage-gated channel beta subunit 4.
     
  0.861
SCNN1A
Sodium channel epithelial 1 alpha subunit.
     
 0.841
SCN1B
Sodium voltage-gated channel beta subunit 1.
     
  0.840
ENSCAPP00000017224
annotation not available
     
 0.754
SCN10A
Sodium voltage-gated channel alpha subunit 10.
    
 0.746
SLC7A13
Solute carrier family 7 member 13.
   
 
 0.710
SCN11A
Sodium voltage-gated channel alpha subunit 11.
    
 0.710
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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