Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPNDMPN domain containing. (438 aa)    
Predicted Functional Partners:
ENSCAPP00000016987
annotation not available
   
 0.976
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.975
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.975
ENSCAPP00000014603
annotation not available
  
 0.975
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
 0.973
PSMD1
Proteasome 26S subunit, non-ATPase 1.
   
 0.972
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 0.972
PSMD8
Proteasome 26S subunit, non-ATPase 8.
   
 0.972
PSMA3
Proteasome 20S subunit alpha 3.
   
 0.971
PSMA1
Proteasome 20S subunit alpha 1.
   
 0.971
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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