Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC93Coiled-coil domain containing 93. (513 aa)    
Predicted Functional Partners:
CCDC22
Coiled-coil domain containing 22.
   
 
 0.990
VPS26C
VPS26 endosomal protein sorting factor C.
    
 
 0.986
ENSCAPP00000014595
annotation not available
    
 
 0.986
COMMD4
COMM domain containing 4.
    
 
 0.985
COMMD9
COMM domain containing 9.
    
 
 0.985
ENSCAPP00000018579
annotation not available
    
 
 0.985
DENND10
DENN domain containing 10.
    
 
 0.981
ENSCAPP00000012458
annotation not available
    
 
 0.972
ENSCAPP00000015803
annotation not available
   
 
 0.968
ENSCAPP00000018671
annotation not available
   
 
 0.968
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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