FHOD3 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FHOD3

Formin homology 2 domain containing 3. (1407 aa)

Predicted Functional Partners:

ENSCAPP00000012887

0.698

ROCK1

0.607

ENSCAPP00000001344

0.604

ENSCAPP00000008807

0.604

ENSCAPP00000010007

0.604

ENSCAPP00000001998

0.594

ENSCAPP00000003219

0.594

ENSCAPP00000014372

0.528

STAB1

0.435

CCDC151

0.413

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC151	FHOD3	ENSCAPP00000000064	ENSCAPP00000003859	Coiled-coil domain containing 151.	Formin homology 2 domain containing 3.	0.413
ENSCAPP00000001344	ENSCAPP00000001998	ENSCAPP00000001344	ENSCAPP00000001998	annotation not available	annotation not available	0.733
ENSCAPP00000001344	ENSCAPP00000003219	ENSCAPP00000001344	ENSCAPP00000003219	annotation not available	annotation not available	0.888
ENSCAPP00000001344	ENSCAPP00000008807	ENSCAPP00000001344	ENSCAPP00000008807	annotation not available	annotation not available	0.943
ENSCAPP00000001344	ENSCAPP00000010007	ENSCAPP00000001344	ENSCAPP00000010007	annotation not available	annotation not available	0.824
ENSCAPP00000001344	FHOD3	ENSCAPP00000001344	ENSCAPP00000003859	annotation not available	Formin homology 2 domain containing 3.	0.604
ENSCAPP00000001998	ENSCAPP00000001344	ENSCAPP00000001998	ENSCAPP00000001344	annotation not available	annotation not available	0.733
ENSCAPP00000001998	ENSCAPP00000003219	ENSCAPP00000001998	ENSCAPP00000003219	annotation not available	annotation not available	0.710
ENSCAPP00000001998	ENSCAPP00000008807	ENSCAPP00000001998	ENSCAPP00000008807	annotation not available	annotation not available	0.741
ENSCAPP00000001998	ENSCAPP00000010007	ENSCAPP00000001998	ENSCAPP00000010007	annotation not available	annotation not available	0.532
ENSCAPP00000001998	ENSCAPP00000014372	ENSCAPP00000001998	ENSCAPP00000014372	annotation not available	annotation not available	0.932
ENSCAPP00000001998	FHOD3	ENSCAPP00000001998	ENSCAPP00000003859	annotation not available	Formin homology 2 domain containing 3.	0.594
ENSCAPP00000003219	ENSCAPP00000001344	ENSCAPP00000003219	ENSCAPP00000001344	annotation not available	annotation not available	0.888
ENSCAPP00000003219	ENSCAPP00000001998	ENSCAPP00000003219	ENSCAPP00000001998	annotation not available	annotation not available	0.710
ENSCAPP00000003219	ENSCAPP00000008807	ENSCAPP00000003219	ENSCAPP00000008807	annotation not available	annotation not available	0.847
ENSCAPP00000003219	ENSCAPP00000010007	ENSCAPP00000003219	ENSCAPP00000010007	annotation not available	annotation not available	0.657
ENSCAPP00000003219	ENSCAPP00000014372	ENSCAPP00000003219	ENSCAPP00000014372	annotation not available	annotation not available	0.925
ENSCAPP00000003219	FHOD3	ENSCAPP00000003219	ENSCAPP00000003859	annotation not available	Formin homology 2 domain containing 3.	0.594
ENSCAPP00000008807	ENSCAPP00000001344	ENSCAPP00000008807	ENSCAPP00000001344	annotation not available	annotation not available	0.943
ENSCAPP00000008807	ENSCAPP00000001998	ENSCAPP00000008807	ENSCAPP00000001998	annotation not available	annotation not available	0.741