STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX60DExD/H-box helicase 60. (1620 aa)    
Predicted Functional Partners:
ENSCAPP00000000576
annotation not available
   
 0.938
ENSCAPP00000004781
annotation not available
   
 0.938
EXOSC10
Exosome component 10.
   
 0.917
TTC37
Tetratricopeptide repeat domain 37.
   
 0.917
EXOSC2
Exosome component 2.
   
 0.896
EXOSC9
Exosome component 9.
    
 0.895
ENSCAPP00000017563
annotation not available
    
 0.892
EXOSC7
Exosome component 7.
   
 0.881
ENSCAPP00000015857
annotation not available
   
 0.870
EXOSC3
Exosome component 3.
   
 0.865
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.