Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REEP2Receptor accessory protein 2. (255 aa)    
Predicted Functional Partners:
REEP1
Receptor accessory protein 1.
    
 
 0.961
REEP4
Receptor accessory protein 4.
    
 
 0.938
CAV3
Caveolin 3.
    
   0.927
ATL1
Atlastin GTPase 1.
   
 
 0.864
RTN2
Reticulon 2.
   
 
 0.861
ENSCAPP00000011785
annotation not available
    
 
 0.827
KCNIP2
Potassium voltage-gated channel interacting protein 2.
    
   0.808
ATL3
Atlastin GTPase 3.
   
 
 0.785
ENSCAPP00000006355
annotation not available
   
 
 0.750
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.697
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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