STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP2Receptor accessory protein 2. (255 aa)    
Predicted Functional Partners:
RTN2
Reticulon 2.
   
 
 0.660
REEP1
Receptor accessory protein 1.
  
 
 
0.631
ATL1
Atlastin GTPase 1.
    
 
 0.623
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
    
 
 0.591
TUBGCP4
Tubulin gamma complex associated protein 4.
      
 0.562
ENSCAPP00000015032
annotation not available
     
 0.557
REEP4
Receptor accessory protein 4.
  
 
 
0.543
TBC1D20
TBC1 domain family member 20.
      
 0.538
INSYN1
Inhibitory synaptic factor 1.
      
 0.536
REEP6
Receptor accessory protein 6.
  
 
 
0.523
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.