Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCTD21Potassium channel tetramerization domain containing 21. (260 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.905
ENSCAPP00000000528
annotation not available
    
   0.896
ENSCAPP00000009408
annotation not available
    
 
 0.781
DOC2A
Double C2 domain alpha.
    
   0.631
KCTD16
Potassium channel tetramerization domain containing 16.
      
 0.568
CUL1
Cullin 1.
    
 0.566
KCTD15
Potassium channel tetramerization domain containing 15.
    
 
 0.559
KCTD1
Potassium channel tetramerization domain containing 1.
    
 
 0.559
RBX1
Ring-box 1.
    
  0.551
ENSCAPP00000001066
annotation not available
    
  0.519
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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