STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN2Sad1 and UNC84 domain containing 2. (712 aa)    
Predicted Functional Partners:
ENSCAPP00000003219
annotation not available
    
 0.999
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.999
CCDC155
Coiled-coil domain containing 155.
    
 0.997
LMNA
Lamin A/C.
    
 0.994
ENSCAPP00000008807
annotation not available
    
 0.993
ENSCAPP00000001998
annotation not available
    
 0.991
ENSCAPP00000001344
annotation not available
    
 0.986
ENSCAPP00000010007
annotation not available
    
 0.986
LRMP
Lymphoid restricted membrane protein.
    
 0.980
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.976
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.