STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP2Matrix metallopeptidase 2. (625 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.981
MMP14
Matrix metallopeptidase 14.
   
0.966
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.956
THBS1
Thrombospondin 1.
    
 0.948
ENSCAPP00000017228
annotation not available
  
0.924
HBEGF
Heparin binding EGF like growth factor.
    
 0.917
CYBA
Cytochrome b-245 alpha chain.
     
 0.915
ENSCAPP00000000633
annotation not available
     
 0.910
ENSCAPP00000001391
annotation not available
     
 0.863
EDN1
Endothelin 1.
     
 0.830
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.