Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003872annotation not available (635 aa)    
Predicted Functional Partners:
PQBP1
Polyglutamine binding protein 1.
    
 0.999
CTNNBL1
Catenin beta like 1.
    
 0.992
CWC15
CWC15 spliceosome associated protein homolog.
   
 0.985
CDC5L
Cell division cycle 5 like.
   
  0.984
PLRG1
Pleiotropic regulator 1.
    
 0.982
DDX5
DEAD-box helicase 5.
    
  0.965
ENSCAPP00000015389
annotation not available
    
  0.959
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 0.939
TCERG1
Transcription elongation regulator 1.
   
 0.938
IK
IK cytokine.
   
  0.936
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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