STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3GALT5Beta-1,3-galactosyltransferase 5. (307 aa)    
Predicted Functional Partners:
ST3GAL2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2.
     
 0.940
B4GALT1
Beta-1,4-galactosyltransferase 1.
   
 
 0.917
ENSCAPP00000005348
annotation not available
     
 0.907
B4GALT4
Beta-1,4-galactosyltransferase 4.
   
 
 0.898
B4GALT3
Beta-1,4-galactosyltransferase 3.
   
 
 0.895
ENSCAPP00000003435
annotation not available
     
 0.888
B4GALT2
Beta-1,4-galactosyltransferase 2.
   
 
 0.881
ST3GAL1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1.
     
 0.880
ENSCAPP00000002395
annotation not available
     
 0.876
ENSCAPP00000003522
annotation not available
     
 0.874
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.